[1]     Belhassine F., Martinez S., Bluy S., Fumey D., Kelner J. J., Costes E., Pallas B. 2019. Impact of within-tree organ distances on floral induction and fruit growth in apple tree: implication of carbohydrate and gibberellin organ contents. Frontiers in Plant Science, 10, 1233.

[2]     Coupel-Ledru A. †, Pallas B. †, Delalande M., Boudon F., Carrié E., Martinez S., Regnard J-L., Costes E. 2019. Multi-scale high-throughput phenotyping of apple architectural and functional traits in orchard reveals genotypic variability under contrasted watering regimes. †co-first author. Horticultural Research 6(1): 52. https://doi.org/10.1038/s41438-019-0137-3

[3]     Falavigna VS, Guitton B, Costes E, Andrès F. 2019. I Want to (Bud) Break Free: The Potential Role of DAM and SVP-Like Genes in Regulating Dormancy Cycle in Temperate Fruit Trees. Front. Plant Sci., 10 January 2019 | https://doi.org/10.3389/fpls.2018.01990

[4]     Gros‐Balthazard, M ,  Besnard, G,  Sarah, G ,  Holtz, Y ,  Leclercq, J ,  Santoni, S ,  Wegmann, D ,  Glémin, S ,  Khadari, B. 2019. Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication. The Plant Journal 100, 143–157.

[5]     Pallas B, Bluy S, Ngao J, Martinez S, Clément-Vidal A, Kelner J-J and Costes E. 2018. Carbon source-sink relationships at organ, shoot and tree scales among apple tree genotypes with contrasted bearing patterns. Tree Physiology. Jan-09 (Epub 2018 Jan 09)

[6]     Picheny V., Casadebaig P., Trepos R., Faivre R., Da Silva D., Vincourt P., Costes E. 2017. Using numerical plant models and phenotypic correlation space to design achievable ideotypes Plant Cell and Environment 40, 1926–1939. https://doi.org/10.1111/pce.13001

[7]     Migault, V., Pallas, B., Costes, E. 2017. Combining genome-wide information with a functional structural plant model to simulate 1-year-old apple tree architecture. Frontiers in Plant Science, 7, 2065. Special Issue Research Topic “Genotype-Phenotype Models of Plant Growth: From Single Genes to Ideotype Prediction”. Frontiers in Plant Science 2016,  7: 2065. doi:10.3389/fpls.2016.02065.

[8]     Durand J.B.†, Allard A.†, Guitton B., van de Weg E., Bink M.C.A.M., Costes E. 2017. Predicting flowering behavior and exploring its genetic determinism in an apple multi-family population based on statistical indices and simplified phenotyping. †co-first author. Frontiers in Plant Science, 8, 858. https://doi.org/10.3389/fpls.2017.00858

[9]     Guitton B., Kelner J.J., J.M. Celton, X. Sabau, J.P. Renou, Chagné D., Costes E. 2016. Analysis of transcripts differentially expressed between fruited and deflowered ‘Gala’ adult trees: a contribution to biennial bearing understanding in apple. BMC Plant Biology. 16:55,  http://www.biomedcentral.com/1471-2229/16/55

[10]   Allard, A., Bink, M.C.A.M., Martinez, S., Kelner, J.J., Legave, J.M., di Guardo, M., Di Pierro, E.A., Laurens, F., van de Weg, E.W.,  Costes, E. 2016. Detecting QTLs and putative candidate genes involved in budbreak and flowering time in an apple multiparental population. In: Journal of Experimental Botany, vol. 67, n. 9, 2875-2888. DOI:  10.1093/jxb/erw130

[11]   Pallas B., Da Silva D., Valsesia P., Yang W., Guillaume O., Lauri P.E., Vercambre G., Génard M., Costes E. 2016. Simulation of carbon allocation and organ growth variability in apple tree by connecting architectural and source–sink models. In: Annals of Botany, vol. 118, n. 2, 317-330. DOI:  10.1093/aob/mcw085

[12]   Costes E., Khadari B., Zaher H., Moukhli A., Morillon R., Legave J.M., Regnard J.L. 2016. Adaptation of Mediterranean fruit tree cultivation to climate change. In The Mediterranean region under climate change: a scientific update. Marseille, France: IRD, 503-510)

[13]   Virlet N., Costes E., Martinez S., Kelner J.J. and Regnard J.J. 2015 Multi-spectral airborne imagery at field opens the way to genetic determinisms of morphological and transpiration traits of an apple tree hybrid population in response to water deficit. Special issue "Phenotyping in Plants" J. Exp. Bot. 66: 5453–5465.

[14]   Gómez Candón, D., Virlet, N., Labbé, S., Jolivot, A., Regnard, J.L. 2016. Field phenotyping of water stress at tree scale by UAV-sensed imagery: New insights for thermal acquisition and calibration. In: Precision Agriculture, vol. 17, n. 6, 786–800. DOI:  10.1007/s11119-016-9449-6

[15]   Schmitz J.D., Herter F.G., Regnard J.L., Leite G.B., Bonhomme M., Cochard H., Lauri P.E. 2015. Is acrotonic budburst pattern in spring a typical behavior of the low-chilling apple cultivar ‘Eva’ in mild winter conditions? An approach combining ex planta single-node cutting test and in planta bud water content during dormancy. In: Scientia Horticulturae, vol. 188, 84-88. DOI:  10.1016/j.scienta.2015.03.024

[16]   Malagi, G., Sachet, M., Citadin, I., Herter, F., Bonhomme, M., Regnard, J.L., Legave, J. 2015. The comparison of dormancy dynamics in apple trees grown under temperate and mild winter climates imposes a renewal of classical approaches. In: Trees-Structure and Function, vol. 29, n. 5, 1365-1380. DOI:  10.1007/s00468-015-1214-3

[17]   Costes, E., Gion, J.M. 2015. Genetics and genomics of tree architecture. In Land Plants-Trees. Amsterdam, The Netherlands: Academic Press, 157-200. (Advances in Botanical Research, vol. 74). DOI:  10.1016/bs.abr.2015.05.001

[18]   Legave, J.M., Guédon, Y., Malagi, G., El Yaacoubi, A., Bonhomme, M. 2015. Differentiated responses of apple tree floral phenology to global warming in contrasting climatic regions. In: Frontiers in Plant Science, vol. 6, 1054 (13 p.). DOI:  10.3389/fpls.2015.01054

[19]   Lopez, G., Pallas, B., Martinez, S., Lauri, P.E., Regnard, J.L., Durel, C.E., Costes, E. 2015. Genetic variation of morphological traits and transpiration in an Apple core collection under well-watered conditions: towards the identification of morphotypes with high water use efficiency. In: PLoS One, vol. 10, n. 12, e0145540 (19 p.). DOI:  10.1371/journal.pone.0145540

[20]   Chalak, L., Haouane, H., Essalouh, L., Santoni, S., Besnard, G., Khadari, B. 2015. Extent of the genetic diversity in Lebanese olive (#Olea europaea# L.) trees: A mixture of an ancient germplasm with recently introduced varieties. Genetic Resources and Crop Evolution, vol. 62, n. 4, 621-633. DOI:  10.1007/s10722-014-0187-1

[21]   Da Silva, D., Han, L., Faivre, R., Costes, E. 2014. Influence of the variation of geometrical and topological traits on light interception efficiency of apple trees: Sensitivity analysis and metamodelling for ideotype definition. Annals of Botany, vol. 114, n. 4, 739-752. DOI:  10.1093/aob/mcu034

[22]   Virlet, N., Lebourgeois, V., Martinez, S., Costes, E., Labbé, S., Regnard, J.L. 2014. Stress indicators based on airborne thermal imagery for field phenotyping a heterogeneous tree population for response to water constraints. Journal of Experimental Botany, vol. 65, n. 18, 5429-5442. DOI:  10.1093/jxb/eru309

[23]   Costes, E., Crespel, L., Denoyes, B., Morel, P., Demene, M.N., Lauri, P.E., Wenden, B. 2014. Bud structure, position and fate generate various branching patterns along shoots of closely related #Rosaceae# species: a review. Frontiers in Plant Science, vol. 5, 666 (11 p.). DOI:  10.3389/fpls.2014.00666

[24]   Mamouni, A., El Bakkali, A., Lambert, P., Krichen, L., Oukabli, A., Audergon, J.M., Chatelet, P., El Modafar, C., Khadari, B. 2014. Bottleneck and gene flow effects impact the genetic structure of seed-propagated apricot populations in Moroccan oasis agroecosystems. Plant Genetic Resources-Characterization and Utilization, vol. 12, n. 2, 215-225. DOI:  10.1017/S1479262113000543